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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888359.1_cds_XP_016442928.1_38143
CDS Infomation

[gene=LOC107768322] [db_xref=GeneID:107768322] [protein=oxysterol-binding protein-related protein 3A-like] [protein_id=XP_016442928.1] [location=complement(join(48043..48292,48998..49176,50240..50384,51335..51511,52202..52323,52446..52564,52661..52733,52836..52952,53787..53880,55239..55354))] [gbkey=CDS]
Sequence

ATGGCGTCCAACAAAGATGAGAAACAAAGCGGTAGCAGTAGTGGAGGCGGTTTCTTTTCC
TCAATAGCATCGAGCTTGTCCAATTTAGGCAGTGCTATGTCTAAATCTGTTAATGGCATG
CTTGGTTATGAAGGGCTGGAAGTTGTAAATCCTGAAGGAGGCAATGAAGATGCTGGTGCT
GAAGCCCAACGAGGAAGATGGAAGGCAGAGGATCGCGATAATTATTGGAAAATGATGCAG
AAGTACATAGGCGCTGATGTTACCTCGTTGGTGACATTGCCGGTTATTATTTGTGAGCCT
ATGACCAACCTTCAAAAAATGGCAGAGTTGATGGAATACGCCTATCTGCTGGACTTGGCA
GATGAGTGCGACGACCCACACATGAGATTAGTGTATTCCGCCTCGTGGTTCATATCCGTA
TACTATGCCTTACAACGCACATGGAAGCCCTTCAACCCCATTCTTGGTGAAACTTATGAA
TTGGTTAACCACGCTGGAATCACATTTATTGCTGAGCAGGTTAGTCATCACCCCCCAATG
GGTGCAGCACATGCAGAAAATGAACATTTCATTTATGATATAACCTCGAAGGTGAAGACC
AAATTCTTGGGAAACTCAGTTGAAGTCTATCCACTTGGCAGGTCAAGGCTCACACTGAAA
AAATCTGGTGTTGTCCTAGATTTAGTGCCTCCTCCAACAAAAGTTCACAATCTTATTTTT
GGTAGAACTTGGATCGATTCGCCTGGGGAGATGATCTTGACGAACCTGACGACAGGGGAT
AAAGTGTTATTGTATTTTCAACCTTGTGGCTGGTTTGGTGCTGGTCGCTATGAAGTTGAT
GGATATGTTTACAACAGTGAGGAAGAACCCAAAATTTTGATGACTGGAAAATGGAATGAA
TCTTTGAGTTATCAACCCTGTGATTTGGAAGGGGAACCCCTGCCAGGCAGCACAATGAAA
GAGGTCTGGAGAGCTGCTGATGCTCCTAAAAATGACAAATTTCAGTATACACATTTTGCT
CACAAGATTAACAGCTTTGATACTGCACCTAAGAAGTTATTAGCATCTGATTCTCGCTTG
CGCCCTGATCGTTACGCACTCGAGAAAGGTGACTTGTCCAAAGCTAGTTCAGAAAAGAGC
CGTTTGGAGGAGAGGCAGAGAGCTGACAGGAGAACAAGAGAGGCCAAGGGCGACGAATTC
AAACCAAAATGGTTCAACTTATCAAATGAAGTTTGCCCTACACCTTGGGGTGATTTGGAG
GTGTATGAGTACAACGGCAAATATCATGAACATCGCGCTGCTATTGATAGTTCTGACCAT
GGTGAAGAGGCTGATGTTAAAACGACTGAGTTTAACCCCTGGCAATATGAAGATTCAGTA
GCTTCTGCATAA

Peptide Sequence

PEP ID

XP_016442928.1
PEP Infomation

PREDICTED: oxysterol-binding protein-related protein 3A-like [Nicotiana tabacum]
Sequence

MASNKDEKQSGSSSGGGFFSSIASSLSNLGSAMSKSVNGMLGYEGLEVVNPEGGNEDAGA
EAQRGRWKAEDRDNYWKMMQKYIGADVTSLVTLPVIICEPMTNLQKMAELMEYAYLLDLA
DECDDPHMRLVYSASWFISVYYALQRTWKPFNPILGETYELVNHAGITFIAEQVSHHPPM
GAAHAENEHFIYDITSKVKTKFLGNSVEVYPLGRSRLTLKKSGVVLDLVPPPTKVHNLIF
GRTWIDSPGEMILTNLTTGDKVLLYFQPCGWFGAGRYEVDGYVYNSEEEPKILMTGKWNE
SLSYQPCDLEGEPLPGSTMKEVWRAADAPKNDKFQYTHFAHKINSFDTAPKKLLASDSRL
RPDRYALEKGDLSKASSEKSRLEERQRADRRTREAKGDEFKPKWFNLSNEVCPTPWGDLE
VYEYNGKYHEHRAAIDSSDHGEEADVKTTEFNPWQYEDSVASA

Transcript Sequence

Gene sequence data has not been registered.